PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN23952.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 349aa    MW: 39333.9 Da    PI: 7.2667
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN23952.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.1e-09174221455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  KHN23952.1 174 SHSLAERVRREKISERMKVLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 221
                 8*************************9....555*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.20E-10168225No hitNo description
SuperFamilySSF474594.58E-17168237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-16170235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.79170220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-6174221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-10176226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MAAFSYQYHP FLVDPAFFPN NLNTPNSPPP PLPSQFQQLP HETSSFNVTN QETSCVDQSS  60
KITISDNEPS VTKNLSPQSS MVVDKLETGE QVTQKVNIPV DKKRRTRNGS SFTSNPQSKD  120
TATEGKNKKQ RKNNGGLKEE DKAKEEKKDQ RKCPEEPPTG YIHVRARRGQ ATDSHSLAER  180
VRREKISERM KVLQRLVPGC DKVTGKALML DEIINYVQSL QNQVEFLSMK LASVNPMFYD  240
LATDLDTLLV RPEKLNSMAS PSPLPSMSHC NSPNNQATTF ADTTTMTPTN IFHTTSDYLL  300
DNSVSFFLQG QRPNVLSEED TGSHFWDAED QRQKFLHPYG FSNNLCSFH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311070.0KT031107.1 Glycine max clone HN_CCL_82 bHLH transcription factor (Glyma06g17420.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003526933.20.0PREDICTED: transcription factor bHLH137-like
SwissprotQ93W882e-59BH137_ARATH; Transcription factor bHLH137
TrEMBLA0A0B2QWE00.0A0A0B2QWE0_GLYSO; Transcription factor bHLH137
TrEMBLI1KBY80.0I1KBY8_SOYBN; BHLH transcription factor
STRINGGLYMA06G17420.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41823358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.23e-54bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]